25 Commits

Author	SHA1	Message	Date
ben	50d04161b7	Merge remote-tracking branch 'origin/main' into zfp-oss	2026-04-22 15:44:12 -04:00
ben	07c72294f5	removing orchestrator references	2026-04-22 10:10:25 -04:00
Mmadrigal	8a66860d33	Moved all contents of to , refactored accordingly	2026-04-21 14:38:06 -04:00
ben	db000da517	Add noqa C901 to view() to pass flake8 complexity check	2026-04-20 15:08:31 -04:00
Mmuq	d3a7e9ef0f	Resolve merge conflict: keep Pass 2 spillover fix over remote's buggy version ... Remote annotationsfix had a partial port of threshold_qualifier without the Pass 2 hysteresis spillover fix. Kept our corrected version in both conflicting sections: - Pass 2 mask expanded by window_size guard band around Pass 1 ranges - Pass 2 expansion runs against residual_power instead of smoothed_power	2026-04-20 12:22:46 -04:00
Mmuq	93ae08bc91	Port threshold_qualifier improvements and Pass 2 spillover fix from utils ... The OSS threshold_qualifier was last synced from utils on Feb 23 2026, before the major robustness improvements landed in utils on Mar 19 2026. This commit brings it fully up to date. Changes ported from utils: - Multi-pass detection (Pass 1 strong burst, Pass 2 weak residual, Pass 3 sustained faint burst via macro-window averaging) - Noise floor estimation via percentile instead of simple max*threshold - Dynamic range ratio guard (early exit on low-contrast captures) - Improved _find_ranges, _expand_and_filter_ranges, _merge_ranges helpers - Spectral smoothing in _estimate_spectral_bounds for wideband bursts - Minimum duration filter expressed in absolute time (5ms) not sample count Also includes the Pass 2 hysteresis spillover fix: - Pass 2 expansion now runs against residual_power (masked) instead of smoothed_power, preventing it from walking into Pass 1 territory - Pass 2 mask now has a window_size guard band around Pass 1 ranges, matching the guard already used in Pass 3 Only change from utils: import swapped to ria_toolkit_oss.datatypes.	2026-04-20 12:11:05 -04:00
Mmadrigal	1005228d69	Linting and updated poetry.lock	2026-04-02 11:07:12 -04:00
Mmadrigal	3eb084bc08	Merge branch 'main' of https://riahub.ai/qoherent/ria-toolkit-oss into annotationsfix	2026-04-02 11:00:42 -04:00
Mmadrigal	c7b88f1f14	Fixed import typo	2026-04-02 10:52:31 -04:00
Mmadrigal	cfa1da9f4d	Linting	2026-04-02 10:37:42 -04:00
ben	c36fdcf607	optimiztions and fixes	2026-04-01 11:57:59 -04:00
F fordg1	5cfced8855	Fix merge conflicts and port all imports from utils to ria_toolkit_oss ... Resolves unresolved merge conflict markers left in committed files across the annotations, view, data, and CLI packages. Updates all remaining imports from the old utils.* namespace to ria_toolkit_oss.datatypes, ria_toolkit_oss.io, and ria_toolkit_oss.view equivalents.	2026-03-31 15:16:32 -04:00
F fordg1	ee2ce3b1f4	Merge branch 'annotationsfix' of https://riahub.ai/qoherent/ria-toolkit-oss into annotationsfix	2026-03-31 14:56:36 -04:00
ben	9a960e2f29	zfp functionality and servers	2026-03-31 13:51:10 -04:00
F fordg1	11d9532b5c	Port annotation system from utils and fix ria package imports ... Annotations package (new): - Add threshold_qualifier with 3-pass hysteresis detector (Pass 1: strong bursts, Pass 2: weak residual bursts, Pass 3: macro-window faint burst detection), auto window_size scaled to 1ms, channel selection, and stable noise_floor baseline throughout - Add energy_detector, cusum_annotator, parallel_signal_separator, qualify_slice, signal_isolation, annotation_transforms - Add __init__.py exporting the four functions used by the CLI - Fix all imports from utils.data → ria_toolkit_oss.datatypes CLI annotate command (new): - Port full annotate CLI from utils including list, add, remove, clear, energy, cusum, threshold, and separate subcommands - Fix imports from utils.* → ria_toolkit_oss.* and utils_cli.* → ria_toolkit_oss_cli.* - Safe overwrite logic: _annotated files always writable, originals protected; --overwrite writes in-place only on _annotated inputs CLI view command: - Add 'annotations' as a valid --type, wiring view_annotations from view_signal view_signal.py: - Add view_annotations function with blue/purple alternating palette and threshold %-sorted drawing order (lower % renders on top) recording.py (datatypes): - Fix lazy imports in to_wav() and to_blue() from utils.io → ria_toolkit_oss.io io/recording.py: - Add compatibility shim in from_npy to remap utils.data.annotation.Annotation to ria_toolkit_oss.datatypes.annotation.Annotation when loading .npy files pickled by the utils package	2026-03-31 13:34:00 -04:00
ben	019b0c6f4b	reformats and campaign additions	2026-03-11 10:27:18 -04:00
Ggillian	af3ae03baf	Moving annotate into CLI	2026-02-23 14:09:42 -05:00
Ggillian	f7eedfa2bd	Annotate added to cli	2026-02-23 13:48:46 -05:00
Mmadrigal	823a0aba85	Linting	2026-01-30 17:43:10 -05:00
Ggillian	00aec7278a	Merge branch 'main' of https://riahub.ai/qoherent/ria-toolkit-oss into viewfix	2026-01-29 13:23:54 -05:00
Mmadrigal	262d6ce9ee	Formatting	2025-12-19 11:25:06 -05:00
Ggillian	97dc1ff272	Added number of samples to capture example	2025-12-17 15:21:04 -05:00
Mmadrigal	a898a0a076	Fixed imports and capture error message	2025-12-15 15:19:49 -05:00
Mmadrigal	b33c0c2e01	Merge branch 'cli' of https://riahub.ai/qoherent/ria-toolkit-oss into cli	2025-12-15 15:08:16 -05:00
Ggillian	fb622f2ec6	moved the cli directory location	2025-12-15 13:51:17 -05:00